Feat: test on pandas xlsx and ods file reader
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@@ -4,6 +4,10 @@ import pandas as pd
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from .repository import AbstractRepository
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ACCEPTABLE_EXTENTIONS = {
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"csv": [".csv"],
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"excel": [".xls", ".xlsx"],
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}
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class FSRepository(AbstractRepository):
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def __init__(self, name, basepath, metadata_engine=None):
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@@ -20,18 +24,30 @@ class FSRepository(AbstractRepository):
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if only_files:
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return [
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str(f.relative_to(dirpath)) for f in dirpath.iterdir() if not f.is_dir()
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if not f.is_dir() and not str(f).startswith(".")
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]
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if only_directories:
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if recursive:
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return [str(f[0].relative_to(dirpath)) for f in dirpath.walk()]
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return [
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str(f[0].relative_to(dirpath))
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for f in dirpath.walk()
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if not str(f).startswith(".")
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]
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return [
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str(f.relative_to(dirpath)) for f in dirpath.iterdir() if f.is_dir()
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if f.is_dir() and not str(f).startswith(".")
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]
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return [str(f.relative_to(dirpath)) for f in dirpath.iterdir()]
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return [
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if not str(f).startswith(".")
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]
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def schemas(self, recursive=True) -> list[str]:
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return self.ls("", only_directories=True, recursive=True)
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@@ -49,16 +65,17 @@ class FSRepository(AbstractRepository):
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table_path = self.build_table_path(table, schema)
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pass
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def read(self, table: str, schema: str = ".", read_options={}):
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def read(self, table: str, schema: str = ".", **read_options):
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table_path = self.build_table_path(table, schema)
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assert table_path.exists()
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extension = table_path.suffix
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if extension == ".csv":
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if extension in ACCEPTABLE_EXTENTIONS["csv"]:
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return pd.read_csv(table_path, **read_options)
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if extension == ".xlsx":
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return pd.read_excel(table_path, **read_options)
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if extension in ACCEPTABLE_EXTENTIONS["excel"]:
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return pd.read_excel(table_path, engine = "openpyxl", **read_options)
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raise ValueError("Can't open the table")
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raise ValueError("Bad extention. Can't open the table.")
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def write(self, content, table: str, schema: str = "."):
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table_path = self.build_table_path(table, schema)
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