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fe780b96ef
...
9d45625a5e
66
Makefile
Normal file
66
Makefile
Normal file
@ -0,0 +1,66 @@
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DATA_BASE=./datas
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PDF_BASE=$(DATA_BASE)/pdfs
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PDF_YEARS=$(wildcard $(PDF_BASE)/*)
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RAW_BASE=$(DATA_BASE)/raw
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RAW_CRG=$(RAW_BASE)/CRG
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RAW_CRG_YEARS=$(subst $(PDF_BASE), $(RAW_CRG), $(PDF_YEARS))
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$(RAW_CRG)/%/: $(wildcard $(PDF_BASE)/%/*)
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echo $(wildcard $(PDF_BASE)/$*/*)
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@echo ----
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ls $(PDF_BASE)/$*/
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@echo ----
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echo $*
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@echo ----
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echo $^
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@echo ----
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echo $?
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#./datas/raw/CRG/%:
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#pdf-oralia extract all --src $$year --dest $$(subst $$PDF_BASE, $$RAW_CRG, $$year)
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# $(RAW_CRG_YEARS): $(PDF_PATHS)
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# for year in $(PDF_PATHS); do \
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# echo $$year; \
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# echo $$(subst $$PDF_BASE, $$RAW_CRG, $$year); \
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# echo "----"; \
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# done;
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extract_pdfs:
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for year in 2021 2022 2023 2024; do \
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mkdir -p $(RAW_CRG)/$$year/extracted;\
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pdf-oralia extract all --src $(PDF_BASE)/$$year/ --dest $(RAW_CRG)/$$year/extracted; \
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pdf-oralia join --src $(RAW_CRG)/$$year/extracted/ --dest $(RAW_CRG)/$$year/; \
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done
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clean_raw:
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rm -rf ./PLESNA Compta SYSTEM/raw/**/*.csv
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clean_built:
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rm -rf $(DATA_BASE)/staging/**/*.csv
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rm -rf $(DATA_BASE)/gold/**/*.csv
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rm -rf $(DATA_BASE)/datamart/**/*.csv
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rm -rf $(DATA_BASE)/datamart/**/*.xlsx
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run_ingest:
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python -m scripts ingest
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run_feature:
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python -m scripts feature
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run_datamart:
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python -m scripts datamart
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build: clean_built run_ingest run_feature run_datamart
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clean_all: clean_built clean_raw
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import_nextcloud:
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rsync -av ~/Nextcloud/PLESNA\ Compta\ SYSTEM/Histoire/ ./datas/Histoire
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push_nextcloud:
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rsync -av ./datas/datamart/ ~/Nextcloud/PLESNA\ Compta\ SYSTEM/DataMart
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10
README.md
10
README.md
@ -1,15 +1,5 @@
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# E(T)LT pour Plesna
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# E(T)LT pour Plesna
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## Installation
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## Concepts
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- `dataplatform`: agrégation d'un datacatalogue, de moteur de compute et du dag des transformations.
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- `datacatalogue`: gestion du contenu des datastores.
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- `datastore`: interface de stockage des données.
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- `compute`: moteur de traitement des fluxs.
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- `graph/dag`: organisation logique des fluxs et des données.
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## Stages
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## Stages
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- Raw: fichiers les plus brutes possibles
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- Raw: fichiers les plus brutes possibles
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@ -1,27 +0,0 @@
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from plesna.datastore.datacatalogue import DataCatalogue
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from plesna.graph.graph_set import GraphSet
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class DataPlateformError(Exception):
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pass
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class DataPlateform:
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def __init__(self):
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self._graphset = GraphSet()
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self._metadata_engine = ""
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self._transformations = {}
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self._datacatalogues = {}
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def add_datacatalague(self, name: str, datacatalogue: DataCatalogue):
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if name in self._datacatalogues:
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raise DataPlateformError("The datacatalogue {name} already exists")
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self._datacatalogues[name] = datacatalogue
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@property
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def datacatalogues(self):
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return list(self._datacatalogues)
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def get_datacatalogue(self, name: str):
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return self._datacatalogues[name]
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@ -1,31 +1,18 @@
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import abc
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import abc
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from plesna.models.storage import Schema, Table
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class DataCatalogue:
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class DataCatalogue:
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def __init__(self):
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def __init__(self):
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pass
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pass
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@property
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@abc.abstractmethod
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@abc.abstractmethod
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def schemas(self) -> list[str]:
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def schemas(self) -> dict[str:str]:
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"""List schema's names"""
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"""List schemas"""
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raise NotImplementedError
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raise NotImplementedError
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@abc.abstractmethod
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@abc.abstractmethod
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def schema(self, name: str) -> Schema:
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def tables(self, schema) -> dict[str:str]:
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"""Get the schema properties"""
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"""List table in schema"""
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raise NotImplementedError
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@abc.abstractmethod
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def tables(self, schema:str) -> list[str]:
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"""List table's name in schema"""
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raise NotImplementedError
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@abc.abstractmethod
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def table(self, schema:str, table:str) -> Table:
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"""Get the table properties"""
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raise NotImplementedError
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raise NotImplementedError
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@abc.abstractmethod
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@abc.abstractmethod
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@ -1,81 +0,0 @@
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from pathlib import Path
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from pydantic import BaseModel, computed_field
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from plesna.models.storage import Schema, Table
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from .datacatalogue import DataCatalogue
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class FakeSchema(BaseModel):
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name: str
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@computed_field
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@property
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def ref(self) -> Schema:
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return Schema(
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id=str(self.name),
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value=str(self.name),
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)
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class FakeTable(BaseModel):
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name: str
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data: dict[str, list]
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@computed_field
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@property
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def ref(self) -> Table:
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return Table(
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id=str(self.name),
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value=str(self.name),
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)
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class FakeDataCatalogue(DataCatalogue):
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"""DataCatalogue based on dictionnaries"""
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def __init__(self, name: str):
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self.name = name
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def ls(
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self, dir="", only_files=False, only_directories=False, recursive=False
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) -> list[str]:
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dirpath = self._basepath / dir
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if only_files:
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return [
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if not f.is_dir() and not str(f).startswith(".")
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]
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if only_directories:
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if recursive:
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return [
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str(f[0].relative_to(dirpath))
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for f in dirpath.walk()
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if not str(f).startswith(".")
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]
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return [
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if f.is_dir() and not str(f).startswith(".")
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]
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return [
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str(f.relative_to(dirpath))
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for f in dirpath.iterdir()
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if not str(f).startswith(".")
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]
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def schemas(self) -> dict[str, FSSchema]:
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"""List schemas (sub directories within basepath)"""
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subdirectories = self.ls("", only_directories=True, recursive=True)
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return {str(path): FSSchema(path=path) for path in subdirectories}
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def tables(self, schema_id=".") -> dict[str, FSTable]:
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"""List table in schema (which are files in the directory)"""
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schema_path = schema_id
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return {path: FSTable(path=path) for path in self.ls(schema_path, only_files=True)}
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|
@ -7,6 +7,18 @@ from plesna.models.storage import Schema, Table
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from .datacatalogue import DataCatalogue
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from .datacatalogue import DataCatalogue
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|
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class FSSchema(BaseModel):
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|
path: Path
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|
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|
@computed_field
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|
@property
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|
def ref(self) -> Schema:
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|
return Schema(
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|
id=str(self.path),
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|
value=str(self.path),
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|
)
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|
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|
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class FSTable(BaseModel):
|
class FSTable(BaseModel):
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path: Path
|
path: Path
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|
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@ -19,20 +31,6 @@ class FSTable(BaseModel):
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)
|
)
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|
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|
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class FSSchema(BaseModel):
|
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path: Path
|
|
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tables: list[str]
|
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|
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@computed_field
|
|
||||||
@property
|
|
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def ref(self) -> Schema:
|
|
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return Schema(
|
|
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id=str(self.path),
|
|
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value=str(self.path),
|
|
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)
|
|
||||||
|
|
||||||
|
|
||||||
|
|
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class FSDataCatalogue(DataCatalogue):
|
class FSDataCatalogue(DataCatalogue):
|
||||||
"""DataCatalogue based on files tree structure"""
|
"""DataCatalogue based on files tree structure"""
|
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|
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@ -74,18 +72,12 @@ class FSDataCatalogue(DataCatalogue):
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if not str(f).startswith(".")
|
if not str(f).startswith(".")
|
||||||
]
|
]
|
||||||
|
|
||||||
@property
|
def schemas(self) -> dict[str, FSSchema]:
|
||||||
def schemas(self) -> list[str]:
|
|
||||||
"""List schemas (sub directories within basepath)"""
|
"""List schemas (sub directories within basepath)"""
|
||||||
subdirectories = self.ls("", only_directories=True, recursive=True)
|
subdirectories = self.ls("", only_directories=True, recursive=True)
|
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return [str(d) for d in subdirectories]
|
return {str(path): FSSchema(path=path) for path in subdirectories}
|
||||||
|
|
||||||
def schema(self, schema: str) -> FSSchema:
|
def tables(self, schema_id=".") -> dict[str, FSTable]:
|
||||||
"""List schemas (sub directories within basepath)"""
|
|
||||||
tables = self.ls(schema, only_files=True)
|
|
||||||
return FSSchema(path=Path(schema), tables=tables)
|
|
||||||
|
|
||||||
def table(self, schema: str, table:str) -> FSTable:
|
|
||||||
"""List table in schema (which are files in the directory)"""
|
"""List table in schema (which are files in the directory)"""
|
||||||
schema_path = schema_id
|
schema_path = schema_id
|
||||||
return {path: FSTable(path=path) for path in self.ls(schema_path, only_files=True)}
|
return {path: FSTable(path=path) for path in self.ls(schema_path, only_files=True)}
|
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|
@ -1,43 +0,0 @@
|
|||||||
from pathlib import Path
|
|
||||||
|
|
||||||
import pytest
|
|
||||||
|
|
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from plesna.dataplatform import DataPlateform
|
|
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from plesna.datastore.fs_datacatalogue import FSDataCatalogue
|
|
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|
|
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FIXTURE_DIR = Path(__file__).parent / Path("raw_data")
|
|
||||||
|
|
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|
|
||||||
@pytest.fixture
|
|
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def raw_catalogue(tmp_path):
|
|
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raw_path = Path(tmp_path) / "raw"
|
|
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raw_path.mkdir()
|
|
||||||
return FSDataCatalogue("raw", raw_path)
|
|
||||||
|
|
||||||
|
|
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@pytest.fixture
|
|
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def bronze_catalogue(tmp_path):
|
|
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bronze_path = Path(tmp_path) / "bronze"
|
|
||||||
bronze_path.mkdir()
|
|
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return FSDataCatalogue("bronze", bronze_path)
|
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
|
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def silver_catalogue(tmp_path):
|
|
||||||
silver_path = Path(tmp_path) / "silver"
|
|
||||||
silver_path.mkdir()
|
|
||||||
return FSDataCatalogue("silver", silver_path)
|
|
||||||
|
|
||||||
|
|
||||||
def test_add_catalogue(
|
|
||||||
raw_catalogue: FSDataCatalogue,
|
|
||||||
bronze_catalogue: FSDataCatalogue,
|
|
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silver_catalogue: FSDataCatalogue,
|
|
||||||
):
|
|
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dp = DataPlateform()
|
|
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dp.add_datacatalague("raw", raw_catalogue)
|
|
||||||
dp.add_datacatalague("bronze", bronze_catalogue)
|
|
||||||
dp.add_datacatalague("silver", silver_catalogue)
|
|
||||||
|
|
||||||
assert dp.datacatalogues == ["raw", "bronze", "silver"]
|
|
||||||
assert dp.get_datacatalogue("raw") == raw_catalogue
|
|
@ -4,9 +4,8 @@ from pathlib import Path
|
|||||||
import pytest
|
import pytest
|
||||||
|
|
||||||
from plesna.datastore.fs_datacatalogue import FSDataCatalogue
|
from plesna.datastore.fs_datacatalogue import FSDataCatalogue
|
||||||
from plesna.models.storage import Schema
|
|
||||||
|
|
||||||
FIXTURE_DIR = Path(__file__).parent.parent / Path("./raw_datas/")
|
FIXTURE_DIR = Path(__file__).parent / Path("./fs_files/")
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
@pytest.fixture
|
||||||
@ -43,19 +42,31 @@ def test_init(location):
|
|||||||
|
|
||||||
def test_list_schema(location):
|
def test_list_schema(location):
|
||||||
repo = FSDataCatalogue("example", location)
|
repo = FSDataCatalogue("example", location)
|
||||||
|
assert {id: s.model_dump()["ref"]["id"] for id, s in repo.schemas().items()} == {
|
||||||
|
".": ".",
|
||||||
|
"username": "username",
|
||||||
|
"salary": "salary",
|
||||||
|
}
|
||||||
|
assert {id: s.model_dump()["ref"]["value"] for id, s in repo.schemas().items()} == {
|
||||||
|
".": ".",
|
||||||
|
"username": "username",
|
||||||
|
"salary": "salary",
|
||||||
|
}
|
||||||
|
assert {id: s.model_dump()["path"] for id, s in repo.schemas().items()} == {
|
||||||
|
".": Path("."),
|
||||||
|
"username": Path("username"),
|
||||||
|
"salary": Path("salary"),
|
||||||
|
}
|
||||||
|
|
||||||
assert repo.schemas == [".", "username", "salary"]
|
|
||||||
assert repo.schema(".").ref == Schema(id=".", value=".")
|
|
||||||
assert repo.schema("username").ref == Schema(id="username", value="username")
|
|
||||||
|
|
||||||
def test_list_tables_schema(location):
|
def test_list_tables(location):
|
||||||
repo = FSDataCatalogue("example", location)
|
repo = FSDataCatalogue("example", location)
|
||||||
|
assert repo.tables() == {}
|
||||||
assert repo.schema(".").tables == []
|
assert {id: t.model_dump()["ref"]["value"] for id,t in repo.tables("username").items()} == {
|
||||||
assert repo.schema("username").tables == [
|
"username.csv": "username.csv",
|
||||||
'username.csv',
|
"username-password-recovery-code.xlsx": "username-password-recovery-code.xlsx",
|
||||||
'username-password-recovery-code.xlsx',
|
"username-password-recovery-code.xls": "username-password-recovery-code.xls",
|
||||||
'username-password-recovery-code.xls',
|
}
|
||||||
]
|
assert {id: t.model_dump()["ref"]["value"] for id,t in repo.tables("salary").items()} == {
|
||||||
assert repo.schema("salary").tables == ["salary.pdf"]
|
"salary.pdf": "salary.pdf",
|
||||||
|
}
|
||||||
|
@ -1,39 +0,0 @@
|
|||||||
from pathlib import Path
|
|
||||||
|
|
||||||
import pytest
|
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||||||
|
|
||||||
from plesna.dataplatform import DataPlateform
|
|
||||||
from plesna.datastore.fs_datacatalogue import FSDataCatalogue
|
|
||||||
|
|
||||||
FIXTURE_DIR = Path(__file__).parent / Path("raw_data")
|
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
|
||||||
def raw_catalogue(tmp_path):
|
|
||||||
raw_path = Path(tmp_path) / "raw"
|
|
||||||
return FSDataCatalogue(raw_path)
|
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
|
||||||
def bronze_catalogue(tmp_path):
|
|
||||||
bronze_path = Path(tmp_path) / "bronze"
|
|
||||||
return FSDataCatalogue(bronze_path)
|
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
|
||||||
def silver_catalogue(tmp_path):
|
|
||||||
silver_path = Path(tmp_path) / "silver"
|
|
||||||
return FSDataCatalogue(silver_path)
|
|
||||||
|
|
||||||
|
|
||||||
@pytest.fixture
|
|
||||||
def dataplateform(
|
|
||||||
raw_catalogue: FSDataCatalogue,
|
|
||||||
bronze_catalogue: FSDataCatalogue,
|
|
||||||
silver_catalogue: FSDataCatalogue,
|
|
||||||
):
|
|
||||||
dp = DataPlateform()
|
|
||||||
dp.add_datacatalague("raw", raw_catalogue)
|
|
||||||
dp.add_datacatalague("bronze", bronze_catalogue)
|
|
||||||
dp.add_datacatalague("silver", silver_catalogue)
|
|
||||||
pass
|
|
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@ -1,7 +0,0 @@
|
|||||||
Username;Identifier;First name;Last name
|
|
||||||
booker12;9012;Rachel;Booker
|
|
||||||
grey07;2070;Laura;Grey
|
|
||||||
johnson81;4081;Craig;Johnson
|
|
||||||
jenkins46;9346;Mary;Jenkins
|
|
||||||
smith79;5079;Jamie;Smith
|
|
||||||
|
|
|
Loading…
Reference in New Issue
Block a user